AlterLab AlphaFold DB
技能 已验证 活跃Access AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology. Part of the AlterLab Academic Skills suite.
To enable researchers to easily access, download, and analyze AI-predicted protein structures from the AlphaFold database for applications in drug discovery and structural biology.
功能
- Retrieve AlphaFold structures by UniProt ID
- Download PDB/mmCIF coordinate files
- Analyze pLDDT and PAE confidence metrics
- Access bulk data via Google Cloud
- Integrate with Biopython for structural analysis
使用场景
- Investigating protein structures for drug discovery targets
- Analyzing confidence metrics of predicted structures
- Integrating AlphaFold data into computational biology pipelines
- Downloading large datasets of protein structures for research
非目标
- Predicting new protein structures
- Experimental structure determination
- Performing complex molecular dynamics simulations
实践
- Bioinformatics data access
- Structural biology analysis
先决条件
- Python 3.8+
- Biopython library
- Requests library
Trust
- info:Issues AttentionThere are 2 open issues and 0 closed issues in the last 90 days, indicating low current activity but also a small number of issues.
安装
npx skills add AlterLab-IEU/AlterLab-Academic-Skills通过 npx 运行 Vercel skills CLI(skills.sh)— 需要本地安装 Node.js,以及至少一个兼容 skills 的智能体(Claude Code、Cursor、Codex 等)。前提是仓库遵循 agentskills.io 格式。
质量评分
已验证类似扩展
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